DOI QR코드

DOI QR Code

Possibility of Using DNA Chip Technology for Diagnosis of Human Papillomavirus

  • Liu, Cui-Hua (Institute of Molecular Biology, First Uniform Medical University) ;
  • Ma, Wen-Li (Institute of Molecular Biology, First Uniform Medical University) ;
  • Shi, Rong (Institute of Molecular Biology, First Uniform Medical University) ;
  • Ou, Yang-Qian (Institute of Molecular Biology, First Uniform Medical University) ;
  • Zhang, Bao (Institute of Molecular Biology, First Uniform Medical University) ;
  • Zheng, Wen-Ling (Institute of Molecular Oncology, Guangzhou General Hospital of Guangzhou Command)
  • Received : 2002.12.10
  • Accepted : 2003.02.14
  • Published : 2003.07.31

Abstract

To explore the application of DNA chip technology for the detection and typing of Human Papillomavirus (HPV), the HPV6, 11, 16 and 18 gene fragments were isolated and printed onto aminosilane-coated glass slides by a PixSys 5500 microarrayer as probes to prepare the HPV gene chips. HPV samples, after being labeled with fluorescent dye by restriction display PCR (RD-PCR) technology, were hybridized with the microarray, which was followed by scanning and analysis. The experimental condition for preparing the HPV gene chips was investigated, and the possibility of HPV genotyping using gene chips was discussed. The technique that was established in this study for preparing HPV gene chips is practical. The results of the present study demonstrated the versatility and inspiring prospect of using this technology to detect and genotype HPV.

Keywords

References

  1. Bosch F. X. and de Sanjose, S. (2002) Human papillomavirus in cervical cancer. Curr. Oncol. Rep. 4, 175-183. https://doi.org/10.1007/s11912-002-0079-y
  2. Ma, W., Zheng, W., Cui, D., Song, Y. and Wu, Q. (2000) DNA microarray chips made on surface of ceramic slides. Acta Bio Bioph Sin. 32, 285-289.
  3. Ma, W., Zheng, W. and James, F. B. (1998) Restriction display: a kind of new technology of differential display; in Progress in Biochemistry and Molecular Biology of Army. Briefing, Sun, Z. X. (ed.), p. 113, Beijing, Uniform Medical Science Press, P. R. China.
  4. McFadden, S. E. and Schumann, L. (2001) The role of human papillomavirus in screening for cervical cancer. J. Am. Acad. Nurse Pract. 13, 116-125. https://doi.org/10.1111/j.1745-7599.2001.tb00231.x
  5. Monos, M. and Ting, Y. (1990) PCR Protocols: A guide to methods and application, pp. 365-367, Academic Press, San Diego, USA.
  6. Pao, C. C., Lin, C. Y., Maa, J. S., Lai, C. H., Wu, S. Y. and Soong, Y. K. (1990) Detection of human papillomaviruses in cervicovaginal cells using polymerase chain reaction. J. Infect. Dis. 161, 113-115. https://doi.org/10.1093/infdis/161.1.113
  7. Vernet, G. (2002) DNA-chip technology and infectious diseases.Virus Res. 82, 65-71.
  8. Yu, H., Chao, J., Patek, D., Mujumdar, R., Mujumdar, S. and Waggoner, A. S. (1994) Cyanine dye dUTP analogs for enzymatic labeling of DNA probes. Nucleic Acids Res. 22, 3226-3232. https://doi.org/10.1093/nar/22.15.3226
  9. Zhang, B., Ma, W., Hu, Z., Shi, R., Song, Y. and Zheng, W. (2002) A method for evaluation of the quality of DNA microarray spots. J. Biochem. Mol. Biol. 35, 532-535. https://doi.org/10.5483/BMBRep.2002.35.5.532
  10. Zheng, W., Ma, W. and Waes, C. V. (1998). The differential display of poly A polymerase in tumor cells of differential malignancy; in Investigation on Cell Modulation, Ye, X. S. and Shen, B. F. (eds.), Uniform Medical Publishing, Beijing, P. R. China. 73-79.

Cited by

  1. An oligoarray for the detection of human papillomavirus type 16 variants vol.17, pp.5, 2007, https://doi.org/10.1111/j.1525-1438.2007.00832.x
  2. HPV Genotyping 9G Membrane Test vol.5, pp.11, 2013, https://doi.org/10.3390/v5112840
  3. Detection of HPV genotypes in cervical lesions by the HPV DNA Chip and sequencing vol.98, pp.3, 2005, https://doi.org/10.1016/j.ygyno.2005.04.044
  4. A LAD-based method for selecting short oligo probes for genotyping applications vol.30, pp.2, 2008, https://doi.org/10.1007/s00291-007-0089-0