Mapping of QTLs for Yield Traits Using an Advanced Backcross Population from a Cross between Oryza sativa and O. glaberrima

Suh, Jung-Pil;Ahn, Sang-Nag;Cho, Young-Chan;Kang, Kyong-Ho;Choi, Im-Soo;Kim, Yeon-Gyu;Suh, Hak-Soo;Hwang, Hung-Goo

  • Published : 2005.12.30

Abstract

Keywords

References

  1. Causse MA, Fulton, TM, Cho YG, Ahn SN, Chunwongse J., Wu K, Xiao J., Yu Z, Ronald PC, Harrington SE, Second G, McCouch SR, Tanksley SO. 1994. Saturated molecular map ofthe rice genome based on an interspecific backcross population. Genetics 138:1251-1274
  2. Chen X, Temnykh S, Xu Y, Cho YG, McCouch SR. 1997. Development of a microsatellite framework map providing genome-wide coverage in rice (Oryza sativa L.). Theor Appl Genet 95:553-567 https://doi.org/10.1007/s001220050596
  3. Doi K, Yoshimura A, Iwata N. 1998. RFLP mapping and QTL analysis of heading data and pollen sterility using backcross populations between Oryza sativa L. and Oryza glaberrima Steud. Breeding Science 48:395-399
  4. Harushima Y, Kurata N, Yano M, Nagamura Y, Sasaki T, Minobe Y, Nakagahra M. 1996. Detection of segregation distortion in an indica-japonica rice cross using a high-resolution molecular map. Theor Appl Genet 92: 145-150 https://doi.org/10.1007/BF00223368
  5. huang N, Parco A, Mew T, Magapantay G, McCouch S, Guiderdoni E, Xu J., Subudhi P, Angelos ER, Khush GS. 1997. RFLP mapping of isozymes, RAPD and QTLs for grain shape, brown planthopper resistance in a doubled haploid rice population. Mol Breeding 3:105-113 https://doi.org/10.1023/A:1009683603862
  6. Huang XQ, Coster H, Ganal MW, Roder MS. 2003. Advanced backcross QTL analysis for the identification of quantitative trait loci alleles from wild relatives of wheat (Triticum aestivum L.). Theor Appl Genet 106: 1379-1389
  7. Li JX, Yu SB, Xu Co, Tan YF, Gao YJ, Li XH, Qifa Z. 2000. Analyzing quantitative trait loci for yield using a vegetatively replicated F2 population from a cross between the parents of an elite rice hybrid. Theor Appl Genet 101 :248-254 https://doi.org/10.1007/s001220051476
  8. Lu C, Shen L, Tan Z, Xu Y, He P, Chen Y, Zhu L. 1996. Comparative mapping of QTLs for agronomic traits of rice across environments using a doubled haploid population. Theor Appl Genet 93:1211-1217 https://doi.org/10.1007/BF00223452
  9. McCouch SR, Kochert G, Yu ZH, Wang ZY, Khush GS. 1988. Molecular mapping of rice chromosomes. Theor Appl Genet 76:815-829 https://doi.org/10.1007/BF00273666
  10. Guimaraes E, Tohme J., McCouch SR. 2001. Quantitative trait loci for yield and yield components in an Oryza sativa $\times$ Oryza rujipogon $BC_2F_2$ population evaluated in an upland environment. Theor Appl Genet 102:41-52 https://doi.org/10.1007/s001220051616
  11. Monty PJ., Michael D, Gabriel K, Aluko, Mande S. 1997. Interspecific Oryza sativa L. $\times$ O. glaberrima Steud. progenies in upland rice improvement. Euphytica 92:237-246
  12. Nelson JC. 1997. Qgene manual. Electronic address: green-genes cit.comell.edu port 70; directory 'Software for genetics/ qGene'
  13. Redona ED, Mackill DJ. 1998. Quantitative trait locus analysis for grain characteristics. Theor Appl Genet 96:957-963 https://doi.org/10.1007/s001220050826
  14. Reversat G, Destombes D. 1998. Screening for resistance to Heterodera sacchari in the two cultivated rice species, Oryza sativa and O. glaberrima. Fund and Appl Nematol 21 :307-317
  15. Sano Y. 1990. The genic nature of gamete eliminator in rice. Genetics 125: 183-191
  16. Sigrid H, Kouame M, Miezan, Moussa S, Souleymane G 2003. Increasing biodiversity of irrigated rice in Africa by interspecific crossing of Oryza glaberrima Steud. $\times$ O. sativa indica L.. Euphytica 132:31-40 https://doi.org/10.1023/A:1024669623283
  17. Tanksley SD, Grandillo S, Fulton TM, Zamir D, Eshed Y, Petiard V, Lopez J., Beck-Bunn T. 1996. Advanced backcross QTL analysis in a cross between an elite processing line of tomato and its wild relative L. pimpinellifolium. Theor Appl Genet 92:213-224 https://doi.org/10.1007/BF00223378
  18. Temnykh S, Park WD, Ayres N, Cartinhour S, Hauck N, Lipovich L, Cho YG, Ishii T, McCouch SR. 2000. Mapping and genome organization of microsatellite sequences in rice (Oryza sativa L.). Theor Appl Genet 100:697-712 https://doi.org/10.1007/s001220051342
  19. Xiao J., Li J., Grandillo S, Ahn SN, Yuan L, Tanksley SD, McCouch SR. 1998. Identification of trait-improving quantitative trait loci alleles from a wild rice relative, Oryza rujipogon. Genetics 150:899-909
  20. Yano M, Harushima Y, Nagamura Y, Kurata N, Minobe Y, Sasaki T. 1997. Identification of quantitative trait loci controlling heading date in rice using a high-density linkage map. Theor Appl Genet 95: 1025-1032 https://doi.org/10.1007/s001220050658