DOI QR코드

DOI QR Code

Immunohistochemical Studies of Human Ribosomal Protein S3 (rpS3)

  • Choi, Soo-Hyun (Department of Biomedical Sciences and Research Institute for Bioscience and Biotechnology, Hallym University) ;
  • Kim, So-Young (Department of Biomedical Sciences and Research Institute for Bioscience and Biotechnology, Hallym University) ;
  • An, Jae-Jin (Department of Biomedical Sciences and Research Institute for Bioscience and Biotechnology, Hallym University) ;
  • Lee, Sun-Hwa (Department of Biomedical Sciences and Research Institute for Bioscience and Biotechnology, Hallym University) ;
  • Kim, Dae-Won (Department of Biomedical Sciences and Research Institute for Bioscience and Biotechnology, Hallym University) ;
  • Won, Moo-Ho (Department of Anatomy, College of Medicine, Hallym University) ;
  • Kang, Tae-Cheon (Department of Anatomy, College of Medicine, Hallym University) ;
  • Park, Jin-Seu (Department of Biomedical Sciences and Research Institute for Bioscience and Biotechnology, Hallym University) ;
  • Eum, Won-Sik (Department of Biomedical Sciences and Research Institute for Bioscience and Biotechnology, Hallym University) ;
  • Kim, Joon (Laboratory of Biochemistry, School of Life Sciences & Biotechnology and BioInstitute, Korea University) ;
  • Choi, Soo-Young (Department of Biomedical Sciences and Research Institute for Bioscience and Biotechnology, Hallym University)
  • Received : 2006.01.03
  • Accepted : 2006.01.13
  • Published : 2006.03.31

Abstract

The human ribosomal protein S3 (rpS3) was expressed in E. coli using the pET-I5b vector and the monoclonal antibodies (mAbs) were produced and characterized. A total of five hybridoma cell lines were established and the antibodies recognized a single band of molecular weight of 33 kDa on immunoblot with purified rpS3. When the purified rpS3 was incubated with the mAbs, the UV endonuclease activity of rpS3 was inhibited up to a maximum of 49%. The binding affinity of mAbs to rpS3 determined by using a biosensor technology showed that they have similar binding affinities. Using the anti-rpS3 antibodies as probes, we investigated the cross-reactivities of various other mammalian brain tissues and cell lines, including human. The immunoreactive bands on Western blots appeared to be the same molecular mass of 33 kDa in all animal species tested. They also appear to be extensively cross-reactive among different organs in rat. These results demonstrated that only one type of immunologically similar rpS3 protein is present in all of the mammalian brain tissues including human. Furthermore, these antibodies were successfully applied in immunohistochemistry in order to detect rpS3 in the gerbil brain tissues. Among the various regions in the brain tissues, the rpS3 positive neurons were predominantly observed in the ependymal cells, hippocampus and substantia nigra pars compacta. The different distributions of rpS3 in brain tissues reply that rpS3 protein may play an important second function in the neuronal cells.

Keywords

References

  1. Bradford, M. A. (1976) A rapid and sensitive method for the quantification of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem. 72, 248-254 https://doi.org/10.1016/0003-2697(76)90527-3
  2. Chan, Y. L., Olivera, J., Paz, V. and Wool, I. G. (1996) The primary structure of rat ribosomal protein S3a and of S3b. Biochem. Biophys. Res. Commun. 228, 141-147 https://doi.org/10.1006/bbrc.1996.1629
  3. Choi, E. Y., Jang, S. H., and Choi, S. Y. (1996) Human brain GABA transaminase is immunologically distinct from those of other mammalian brain. Neurochem. Int. 28, 597-600 https://doi.org/10.1016/0197-0186(95)00111-5
  4. Choi, E. Y., Park, S. Y., Jang, S. H., Song, M. S., Cho, S. W. and Choi, S. Y. (1995) Production and characterization of monoclonal antibodies to bovine brain succinic semialdehyde reductase. J. Neurochem. 64, 371-377 https://doi.org/10.1046/j.1471-4159.1995.64010371.x
  5. Crosio, C., Cecconi, F., Mariottini, P., Cesareni, G., Brenner, S. and Amaldi, F. (1996) Fugu intron oversize reveals the presence of U15 snoRNA coding sequences in some introns of the ribosomal protein S3 gene. Genome Res. 6, 1227-1231 https://doi.org/10.1101/gr.6.12.1227
  6. Demple, B. and Linn, S. (1980) DNA N-glycosylase and UV repair. Nature 287, 203-208 https://doi.org/10.1038/287208a0
  7. Deutsch, W. A., Yacoub, A., Jaruga, P., Zastawny, T. H. and Dizdaroglu, M. (1997) Characterization and mechanism of action of Drosophila ribosomal protein S3 DNA glycosylase activity for the removal oxidatively damaged DNA base. J. Biol. Chem. 272, 32857-32860 https://doi.org/10.1074/jbc.272.52.32857
  8. Dieci, G., Bottarelli, L., Ballabeni, A. and Ottonello, S. (2000) t- RNA assisted overproduction of eukaryotic ribosomal proteins. Prot. Exp. Pur. 18, 346-354 https://doi.org/10.1006/prep.2000.1203
  9. Doetsch, P. W. and Cunningham, R. P. (1990) The enzymology of apurinic/apyrimidinic endonucleases. Mutat. Res. 236, 173-201 https://doi.org/10.1016/0921-8777(90)90004-O
  10. Eum, W. S., Choi, H. S., Kim, D. W., Jang, S. H., Choi, S. H., Kim, S. Y., Park, J., Kang, J. H., Cho, S. W., Kwon, O. S., Hwang, I. K., Yoo, K. Y., Kang, T. C., Won, M. H. and Choi, S. Y. (2005) Production and characterization of monoclonal antibodies against human ceruloplasmin. J. Biochem. Mol. Biol. 38, 71-76 https://doi.org/10.5483/BMBRep.2005.38.1.071
  11. Fagerstam, L. G., Karlsson, A. F., Karlsson, R., Persson, B. and Ronnberg, I. (1992) Biospecific interaction analysis using surface plasmon resonance detection applied to kinetic, binding site and concentration analysis. J. Chromatogr. 597, 397-410 https://doi.org/10.1016/0021-9673(92)80137-J
  12. Gorell, J. M., Johnson, C. C., Rybicki, B. A., Peterson, E. L. and Richardson, R. J. (1998) The risk of Parkinson's disease with exposure to pesticides, farming, well water, and rural living. Neurol. 50, 1346-1350 https://doi.org/10.1212/WNL.50.5.1346
  13. Hedge, V., Kelley, M. R., Xu, Y., Mian, S. and Deutsch, W. A. (2001) Conversion of the bifunctional 8-oxoguanine/b-d apurine/apyrimidine DNA repair activaties of Drosophila ribosomal protein S3 into the human S3 monofunctional ${\beta}$- elimination catalyst through a single amino acid change. J. Biol. Chem. 276, 27591-27596 https://doi.org/10.1074/jbc.M101213200
  14. Hollstein, M. C., Brooks, P., Linn, S. and Ames, B. R. (1984) Hydroxymethyluracil DNA glycosylase in mammalian cells. Biochemistry 81, 4003-4007
  15. Jang, C. Y., Lee, J. Y. and Kim, J. (2004) RpS3, a DNA repair endonuclease and ribosomal protein, is involved in apoptosis. FEBS Lett. 560, 81-85 https://doi.org/10.1016/S0014-5793(04)00074-2
  16. Jang, S. H., Kim, A. Y., Bahn, J. H., Eum, W. S., Kim, D. W., Park, J., Lee, K. S., Kang, T. C., Won, M. H., Kang, J. H., Kwon, O. S., Yoon, H. Y., Lee, E. Y., Cho, S. W. and Choi, S. Y. (2003) Human glutamate dehydrogenase is immunologically distinct from other mammalian orthologus. Exp. Mol. Med. 35, 249-256 https://doi.org/10.1038/emm.2003.33
  17. Jung, S., Lee, J. and Kim, J. (2001) Yeast ribosomal protein S3 has an endonuclease activity on AP DNA. Mol. Cells 12, 84- 90
  18. Kim, D. W., Eum, W. S., Choi, H. S., Kim, S. Y., An, J. J., Lee, S. H., Sohn, E. J., Hwang, S. I., Kwon, O. S., Kang, T. C., Won, M. H., Cho, S. W., Lee, K. S., Park, J. and Choi, S. Y. (2005) Human brain pyridoxal-5'-phosphate phosphatase: production and characterization of monoclonal antibodies. J. Biochem. Mol. Biol. 38, 703-708 https://doi.org/10.5483/BMBRep.2005.38.6.703
  19. Kim, J., Chubatsu, L. S., Admon, A., Stahl, J., Fellous, R. and Linn, S. (1995) Implication of mammalian ribosomal protein S3 in the processing of DNA damage. J. Biol. Chem. 270, 13620-13629 https://doi.org/10.1074/jbc.270.23.13620
  20. Kim, J. and Linn, S. (1988) The mechanisms of action of E. coli endonuclease and T4 UV endonuclease (endonuclease ) at AP sites. Nucleic Acids Res. 16, 1135-1141 https://doi.org/10.1093/nar/16.3.1135
  21. Kim, S. H., Lee, J. Y. and Kim, J. (2005) Characterization of a wide range base-damage-endonuclease activity of mammalian rpS3. Biochem. Biophys. Res. Commun. 328, 962-967 https://doi.org/10.1016/j.bbrc.2005.01.045
  22. Kim, T. S., Jang, C. Y., Kim, H. D., Lee, J. Y., Ahy, B. Y. and Kim, J. (2006) Interaction of Hsp90 with ribosomal proteins protects from ubiquitination and proteasome-dependent degradation. Mol. Biol. Cell. 17, 824-833 https://doi.org/10.1091/mbc.E05-08-0713
  23. Laemmli, U. K. (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227, 680- 685 https://doi.org/10.1038/227680a0
  24. Lee, C. H., Kim, S. H., Choi, J. I., Choi, J. Y., Lee, C. E. and Kim, J. (2002) Electron paramagnetic resonance study reveals a putative iron-sulfur cluster in human rpS3 protein. Mol. Cells 13, 154-156
  25. Lindahl, T. (1993) Instability and decay of the primary structure of DNA. Nature 362, 709-715 https://doi.org/10.1038/362709a0
  26. Lim, Y., Lee, S. M., Kim, M., Lee, J. Y., Moon, E. P., Lee, B. J. and Kim, J. (2002) Complete genomic structure of human rpS3: identification of functional U15b snoRNA in the fifth intron. Gene 286, 291-297 https://doi.org/10.1016/S0378-1119(02)00502-4
  27. Liou, H. H., Tsai, M. C., Chen, C. J., Jeng, J. S., Chang, Y. C., Chen, S. Y. and Chen, R. C. (1997) Environmental risk factors and Parkinson's disease: a case-control study in Taiwan. Neurol. 48, 1583-1588 https://doi.org/10.1212/WNL.48.6.1583
  28. Lyamouri, M., Enerly, E., Kress, H. and Lambertsson, A. (2002) Conservation of gene order, structure and sequence between three closely linked genes in Drosophila melanogaster and Drosophilar virilis. Gene 282, 199-206 https://doi.org/10.1016/S0378-1119(01)00831-9
  29. Malmqvist, M. (1993) Biospecific interaction analysis using biosensor technology. Nature 361, 186-187 https://doi.org/10.1038/361186a0
  30. McCormack, A. L., Thiruchelvam, M., Manning-Bog, A. B., Thiffault, C., Langston, J. W., Cory-Slechta, D. A. and Di Monte, D. A. (2002) Environmental risk factors and Parkinson's disease: selective degeneration of nigral dopaminergic neurons caused by the herbicide paraquat. Neurol. Dis. 10, 119-127 https://doi.org/10.1006/nbdi.2002.0507
  31. Pellizzoni, L., Crosio, C., Campioni, N., Loreni, F. and Pierandrei- Amaldi, P. (1994) Different forms of U15 snoRNA are encoded in the introns of the ribosomal protein S1 gene of Xenopus laevis. Nucleic Acids Res. 22, 4607-4613 https://doi.org/10.1093/nar/22.22.4607
  32. Pogue-Geile, K., Geiser, J. R., Shu, M., Miller, C., Wool, I. R., Meisler, A. I. and Pipas, J. M. (1991) Ribosomal protein genes are overexpressed in colorectal cancer: isolation of a cDNA clone encoding the human S3 ribosomal protein. Mol. Cell. Biol. 11, 3842-3849 https://doi.org/10.1128/MCB.11.8.3842
  33. Polakiewicz, R. D., Munroe, D. J., Sait, S. N., Tycowski, K. T., Nowak, N. J., Shows, T. B., Housman, D. E. and Page, D. C. (1995) Mapping of ribosomal protein S3 and internally nested snoRNA U15A gene to human chromosome 11q13.3-q13.5. Genomics 25, 577-580 https://doi.org/10.1016/0888-7543(95)80063-R
  34. Rhie, G. E., Seo, J. Y. and Chung, J. H. (2001) Modulation of catalase in human skin in vivo by acute and chronic UV radiation. Mol. Cells 11, 399-404
  35. Sambrook, J., Fritsch, E. and Maniatis, T. (1989) Molecular Cloning: A Labolatory Manual, 2nd ed., Cold Spring Harbor Laboratory Press, Cold Spring Harbar, New York, USA
  36. Sandigursky, M., Yacoub, A., Kelly, M. R., Deutsch, W. A. and Franklin, W. A. (1997) The Drosophila ribosomal protein S3 contains a DNA deoxyribophosphodiesterase (dRpase) activity. J. Biol. Chem. 272, 17480-17484 https://doi.org/10.1074/jbc.272.28.17480
  37. Tolan, D. R., Hershey, J. W. and Traut, R. T. (1983) Crosslinking of eukaryotic initiation factor elF-3 to the 40S ribosomal subunit from rabbit reticulocytes. Biochimie 65, 427-436 https://doi.org/10.1016/S0300-9084(83)80062-5
  38. Towbin, H., Staehelin, T. and Gordon, J. (1979) Electrophoretic transfer of proteins from polyacrylamide gels to nitrocellulose sheet: procedures and some applications. Proc. Natl. Acad. Sci. USA 76, 4350-4354 https://doi.org/10.1073/pnas.76.9.4350
  39. Warner, J. R. (1989) Synthesis of ribosomes in Sacchromyces cerevisiae. Microbiol. Rev. 53, 256-271
  40. Westermann, P., Heumann, W., Bommer, U. A., Bielka, H., Nygard, O. and Hultin, T. (1979) Crosslinking of initiation factor elF-2 to proteins of the small subunit of rat liver ribosomes. FEBS Lett. 97, 101-104 https://doi.org/10.1016/0014-5793(79)80061-7
  41. Willson, D. M., Deutsch, W. A. and Kelly, M. R. (1994) Drosophila ribosomal protein S3 contains an activity that cleaves DNA at apurinic/apyrimidine sites. J. Biol. Chem. 269, 25359-25364
  42. Won, M. H., Kang, T. C., Jeon, G. S., Lee, J. C., Kim, D. Y., Choi, E. M., Lee, K. H., Choi, C. D., Chung, M. H. and Cho, S. S. (1999) Immunohistochemical detection of oxidant DNA damage induced by ischemia-reperfusion insults in gerbil hippocampus in vivo. Brain Res. 836, 70-78 https://doi.org/10.1016/S0006-8993(99)01611-X
  43. Won, M. H., Kang, T. C., Park, S. K., Jeon, G. S., Kim, Y. W., Seo, J. H., Choi, E. M., Chung, M. H. and Cho, S. S. (2001) The alteration of N-methyl-D-aspartate receptor expression and oxidative DNA damage in the CA1 area at the early time after ischemia-repurfusion insult. Neurosci. Lett. 301, 139-142 https://doi.org/10.1016/S0304-3940(01)01625-1
  44. Wool, I. G., Chan, Y. L. and Gluck, A. (1995) Structure and evolution of mammalian ribosomal proteins. Biochem. Cell Biol. 73, 933-947 https://doi.org/10.1139/o95-101
  45. Wool, I. G. (1996) Extraribosomal functions of ribosomal proteins. Trends Biochem. Sci. 21, 164-165 https://doi.org/10.1016/0968-0004(96)20011-8

Cited by

  1. Ischemia-induced ribosomal protein S3 expressional changes and the neuroprotective effect against experimental cerebral ischemic damage vol.86, pp.8, 2008, https://doi.org/10.1002/jnr.21621
  2. Human PEP-1-ribosomal protein S3 protects against UV-induced skin cell death vol.580, pp.30, 2006, https://doi.org/10.1016/j.febslet.2006.11.038
  3. Changes in Ribosomal Protein S3 Immunoreactivity and its Protein Levels in the Gerbil Hippocampus Following Subacute and Chronic Restraint Stress vol.37, pp.7, 2012, https://doi.org/10.1007/s11064-012-0727-z
  4. Changes of Ribosomal Protein S3 Immunoreactivity and Its New Expression in Microglia in the Mice Hippocampus After Lipopolysaccharide Treatment vol.32, pp.4, 2012, https://doi.org/10.1007/s10571-012-9802-x