Korean Journal of Plant Resources (한국자원식물학회지)

  • 제20권6호
  • /
  • Pages.511-517
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  • 2007
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  • 1226-3591(pISSN)
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  • 2287-8203(eISSN)
The Plant Resources Society of Korea (한국자원식물학회)
권호 표지

Strain Distinction and Their Distribution of Barley Yellow Mosaic Virus Base on RAPD Analysis in Korea

  • Park, Jong-Chul (Honam Agricultural Research Institute, NICS, RDA) ;
  • Rho, Tae-Whan (Honam Agricultural Research Institute, NICS, RDA) ;
  • Kim, Jung-Gon (Honam Agricultural Research Institute, NICS, RDA) ;
  • Kim, Hyung-Moo (Faculty of Biological Resources Science, Jeonbuk National University) ;
  • So, In-Young (Faculty of Biological Resources Science, Jeonbuk National University) ;
  • Lee, Kui-Jae (Faculty of Biological Resources Science, Jeonbuk National University)
  • 발행 : 2007.12.30
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초록

A stable method for strain distinction using viral RNA 1 structures analyses was developed and compared with the combined RT-PCR and RAPD methods. Seven out of 61 random primers were found to be polymorphic based on RAPD analysis resulting on the differentiation of the 33 BaYMV isolates into four distinct groups according to geographical districts. The first and largest group includes 13 isolate and consists mainly of two-rowed malting barley in Haenam area. The second group had ten collections from inland in west southern. The third group had seven isolates from west southern coastal region, where mainly six-rowed naked barley is cultivated. The last fourth group included three isolates from Gyungnam region in east southern area. Conclusively, RNA 1 analysis proved to be stable and efficient method for strain distinction for Korean BaYMV isolates. Further, results of pathogenicity and RNA 1 structure analyses revealed four groups BaYMV strains and were distributed all over Korea, represented by Naju, Haenam-okcheon, Iksan and Milyang.

키워드

참고문헌

  1. Adams, M. J., A.G. Swaby and P. Jones. 1987. Occurence of two strains of barley yellow mosaic virus in England Pl. Path. 36: 610-612 https://doi.org/10.1111/j.1365-3059.1987.tb02284.x
  2. Barnett, O. W. 1991. Potyviride, a proposed family of plant viruses. Arch. Virol. 118: 139-141 https://doi.org/10.1007/BF01311310
  3. Dawson, W.O., P. Bubrick and G.L. Grantham. 1988. Modification of the tobacco mosaic virus coat protein gene affecting replication movement and symptomatology. Phytopathology 78: 783-789 https://doi.org/10.1094/Phyto-78-783
  4. Frahm J. H. 1989. Reduced yields caused by BYMV-in Lippe, Westphalia an analysis of causal factors. Gesunde Pflanzen. 41(2): 45-46
  5. Gibbs, A. J. and G.A. McIntyre. 1970. A method for assessing the size of a protein from its composition: Its use in evaluating data on the size of the protein subunits of plant virus particles. J. Gen. Virol. 9: 51-67 https://doi.org/10.1099/0022-1317-9-1-51
  6. Goetz R. and W. Huth. 2005. Molecular comparison of several isolates of Furovirus soil-borne cereal mosaic virus (SBSMV) originating from Germany and France. Sixth International Working Group on Plant Viruses with Fungal Vectors Symposium. Book of Abstract. Bologna, Italia. pp. 85
  7. Huth, W., D.E. Leseman and H.L. Paul. 1984. Barley yellow mosaic virus: purification electron microscopy. serology and other properties of two types of the virus Phytopath. Z. 111: 3754
  8. Kashiwazaki, S. 1989. Characterization of several of barley yellow mosaic virus. Annals of the Phytopathological Society of Japan. 55(1): 16-25 https://doi.org/10.3186/jjphytopath.55.16
  9. Kashiwazaki, S., K. Nomura, H. Kuroda, K. Ito and T. Hibino. 1992. Sequence analysis of the 3'-terminal halves of RNA 1 of two strains of barley mild mosaic virus. J. Gen. Virol. 73: 2173-2181 https://doi.org/10.1099/0022-1317-73-9-2173
  10. Kashiwazaki, S. and H. Hibino. 1996. Genomic reassortment of barley mild mosaic virus: evidence for the involvement of RNA1 in pathogenicity. J. Gen. Virol. 77: 581-585 https://doi.org/10.1099/0022-1317-77-4-581
  11. Lee, K. J., I.Y. So and S. Kashiwazaki. 1998. Isolation and Identification of Barley Yellow Mosaic Virus in Korea. Korean J. Plant Pathol. 14(1): 62-67
  12. Lee, K. J., J.C. Park and W.H. Lee. 2002. Molecular biological approaches on resistant breeding to Barley Yellow Mosaic Virus. Symposium proceeding. Natl. Honam Agricultural Experiment Station. RDA. pp. 71-80
  13. Lee, K. J., J. C. Park, Y.H. Lee, D.K. Lee, M.K. Choi and W. H. Lee. 2002. Sequence Analysis of the 3'- Terminal Redions of RNA 1 of Korea Isolates of Barley Yellow Mosaic Virus Bulletin of the Agricultural College, C.N. Uni. 33: 130-135
  14. Lee, S. H. 1981. Studies on virus disease occurring in various crops in Korea. Res. report, Office Rural Develop. 23: 62-74
  15. Matthews, R. E. F. 1991. Plant Virology in 'Factors influencing the course of infection and disease 460-464' Academic Press, INC. 835
  16. Meckern, N. M., D.D. Shukla, O.W. Barnett, H. J. Vetten, J. Dijkstra, L.W. Whittaker and C.W. Ward. 1992. Coat protein properties suggest that azuki bean virus, blackeye cowpea mosaic virus, peanut stripe virus, and three isolates from soybean are all strains of the same potyvirus. Intervirology 33: 121-134 https://doi.org/10.1159/000150241
  17. Miyamoto, Y. 1958. Studies on soil-borne cereal mosaic. II. On the barley yellow-mosaic virus(part1 )Ann. Phytopathol. Soc. Japan X X III 69: 75
  18. Ordon F., W. Friedti, K. Scheureri, B. Pellio, K. Werner, G. Neuhaus, W. Huth, A. Habekuss and A. Graner. 2004. Molecular markers in breeding for virus resistance in barley. J. Appl. Genet. 45(2): 145-159
  19. Park, J. C., J.H. Seo, H.M. Kim, K.J. Lee, S.L. Park and D.Y. Seo. 2003. Effect of climatic factors on disease incidence of Barley yellow mosaic virus (BaYMV). Korean. J. Crop Sci. 48(3): 156-159
  20. Park J. C., J. H. Seo, M.K. Choi, K.J. Lee and H.M. Kim. 2004. The incidence and distribution of viral diseases in barley fields in Korea. Res. Plant Dis. The Korean Soc. Plant Path. 10(3): 188-193
  21. Ryu, J. H., H.W. Park, W.M. Park, S.Y. Lee and K.H. Ryu. 2000. Molecular analysis of the 3'-terminal region of lily latent carlavirus from Lilium lancitoium. Plant Pathol. J. 16: 231-235
  22. Saito, T., T. Meshi, N. Takamatsu and Y. Okada. 1987. Coat protein gene sequence of tobacco mosaic virus encodes a host response determinate. Proc. Natl. Acad. Sci. U.S.A. 84: 6074-6077
  23. Seo, S. J. 1995. studies on the classification of barley yellow mosaic virus strains and the breeding proposal for resistant barley varieties. Seoul Natl. Uni. pp. 97
  24. Shi, N. N., M. Zhu, J. Chen, R. Stratford, T.M. Wilson, J.F. Antoniw, I.J. Foulds, S.A. MacFarlane and M.J. Adams. 1995. Molecular characterization of UK isolates of barley yellow mosaic bymovirus. Vir. Res. 38: 193-204 https://doi.org/10.1016/0168-1702(95)00057-W
  25. Skotnicki, M. L., A.M. Mackenzie and A.J. Gibbs. 1996. Genetic variation in populations of kennedya yellow mosaic tymovirus. Arch. Virol. 141: 99-110 https://doi.org/10.1007/BF01718591
  26. So, I. Y., S.S. Cheong, K.J. Lee and Y.H. Oh. 1991. Vector of barley yellow mosaic virus and consideration on its control. Res. Rept. RDA 34: 75-83
  27. So, I. Y., S.S. Cheong, K.J. Lee and Y.H. Oh. 1991. Vector of barley yellow mosaic virus and consideration on its control II. Res. Rept. RDA. 33: 203-213
  28. So, I. Y., K.J. Lee, K.H. Chon and J.H. Seo. 1997. Distribution and screening for barley cultivars resistance to barley yellow mosaic virus and barley mild mosaic virus in southern Korea. Korean J. Plant Pathol.13(2): 118-124
  29. Werner K., W. Friedt, E. Launbach, R. Waugh and F. Ordon. 2003. Dissection of resistance to soil-borne yellow-mosaic-inducing viruses of barley (BaMMV, BaYMV, BaYMV-2) in a complex breeders' cross by means of SSRs and simultaneous mapping of BaYMV/BaYMV-2 resistance of var. 'Chikurin Ibaraki 1'. Theor. Appl. Genet. 106: 1425-1432 https://doi.org/10.1007/s00122-002-1188-6
  30. Xiao, X. W., M.J. Frenkel, C.W. Ward and D.D. Shukla. 1994. Nucleotide sequence of the 3'-terminal region of the genome confirms that pea mosaic virus is a strain of bean yellow mosaic Potyvirus. Arch. Virol. 136: 381-387 https://doi.org/10.1007/BF01321066