DOI QR코드

DOI QR Code

Response of Soil Microbial Communities to Applications of Green Manures in Paddy at an Early Rice-Growing Stage

녹비 시용이 초기 논 토양 미생물군집에 미치는 영향

  • Kim, Eun-Seok (Gyeongsangnamdo Agricultural Research and Extension Services) ;
  • Lee, Young-Han (Gyeongsangnamdo Agricultural Research and Extension Services)
  • Received : 2011.03.14
  • Accepted : 2011.03.30
  • Published : 2011.04.30

Abstract

Applications of green manures generally improve the soil quality in rice paddy in part through restructuring of soil microbial communities. To determine how different green manures affect soil microbial communities during the early stages of rice growth, fatty acid methyl ester (FAME) profiles were used to the effects of different management practices: 1) conventional farming (CF), 2) no-treatment (NT), 3) Chinese milk vetch (CMV), 4) green barley (GB), and 5) triticale in paddy field. With applications of green manures, soil organic matter was significantly higher than CF, while soil Na concentration was significantly lower compared with CF (p<0.05). Total soil microbial biomass of CMV was higher (p<0.05) than NF by approximately 31%. The highest ratio of monounsaturated fatty acid to saturated fatty acid was found in the GB plot, followed by CMV and triticale compared with CF (p<0.05), possibly indicating that microbial stress was less in GB and CMV plots. Populations of Gram-negative bacteria and arbuscular mycorrhizal fungi also were significantly higher green manures than CF (p<0.05). Our findings suggest that GB should be considered as optimum green manure for enhancing soil microbial community at an early growing stage in paddy field.

논 토양에서 청보리, 자운영과 트리티케일을 시용하고 벼생육초기에 토양 미생물 생태계의 변화에 미치는 영향을 검토하였다. 녹비를 시용한 처리구는 관행에 비해 토양 유기물 함량은 유의적으로 증가하였으나 토양의 나트륨 함량은 유의적인 감소를 나타냈다. 내생균근균의 함량과 구성비율은 녹비 시용으로 관행 보다 유의적으로 높아졌으며 특히 청보리 처리구가 가장 높았다. 또한 토양의 그람음성 세균과 그람양성 세균의 비율과 불포화지방산과 포화지방산 함량의 비율은 청보리 처리구가 다른 처리구에 비해 유의적인 증가를 보였다. 그리고 주성분 분석에서 PC 1에 가장 큰 영향을 미친 미생물 군집은 그람음성 세균인 것으로 나타났으며 청보리 처리구는 관행과 가장 큰 차이를 나타냈다. 이러한 결과를 종합한 결과 청보리는 논 토양의 초기 미생물 다양성을 증대시킬 수 있는 최적의 녹비작물로 판단된다.

Keywords

References

  1. Balser, T., K.K. Treseder, and M. Ekenler. 2005. Using lipid analysis and hyphal length to quantify AM and saprotrophic fungal abundance along a soil chronosequence. Soil Biol. Biochem. 37:601-604. https://doi.org/10.1016/j.soilbio.2004.08.019
  2. Bossio, D.A. and K.M. Scow. 1998. Impacts of carbon and flooding on soil microbial communities: phospholipid fatty acid profiles and substrate utilization patterns. Microb. Ecol. 35:265-278. https://doi.org/10.1007/s002489900082
  3. Bossio, D.A., K.M. Scow, N. Gunapala, and K.J. Graham. 1998. Determinants of soil microbial communities: effects of management, season and soil type on phospholipid fatty acid profiles. Microb. Ecol. 36:1-12. https://doi.org/10.1007/s002489900087
  4. Bradleya, K., A. Rhae, R.A. Drijberb, and J. Knopsc. 2006. Increased N availability in grassland soils modifies their microbial communities and decreases the abundance of arbuscular mycorrhizal fungi. Soil Biol. Biochem. 38:1583-1595. https://doi.org/10.1016/j.soilbio.2005.11.011
  5. Burgos, N.R. and R.E. Talbert. 1996. Weed control by spring cover crops and imazethapyr in no-till southern pea (Vigna unguiculata). Weed Technol. 10:893-899.
  6. Buyer, J.S. and L.E. Drinkwater. 1997. Comparison of substrate utilization assay and fatty acid analysis of soil microbial communities. J. Microbiol. Meth. 30:3-11. https://doi.org/10.1016/S0167-7012(97)00038-9
  7. Cavigelli, M.A., G.P. Robertson, and M.J. Klug. 1995. Fatty acid methyl ester (FAME) profiles as measures of soil microbial community structure. Plant Soil 170:99-113. https://doi.org/10.1007/BF02183058
  8. Cobb, D., R. Feber, A. Hopkins, L. Stockdale, T. O'Riordan, B. Clements, L. Firbank, K. Goulding, S. Jarvis, and D. Macdonald. 1999. Intergrating the environmental and economic consequences of converting to organic agriculture: evidence from a case study. Land Use Policy 16:207-221. https://doi.org/10.1016/S0264-8377(99)00023-X
  9. Drenovsky, R.E., D. Vo, K.J. Graham, and K.M. Scow. 2004. Soil water content and organic carbon availability are major determinants of soil microbial community composition. Microb. Ecol. 48:424-430. https://doi.org/10.1007/s00248-003-1063-2
  10. Fries, M.R., G.D. Hopkins, P.L. McCarty, L.J. Forney, and J.M. Tiedje. 1997. Microbial succession during a field evaluation of phenol and toluene as the primary substrates for trichloroethene cometabolism. Appl. Environ. Microbiol. 63:1515-1522.
  11. Frostegard, A., A. Tunlid, and E. Baath. 1993. Phospholipid fatty acid composition, biomass and activity of microbial communities from two soil types experimentally exposed to different heavy metals. Appl. Environ. Microbiol. 59:3605-3617.
  12. Frostegard, Å. and E. Baath. 1996. The use of phospholipid fatty acid analysis to estimate bacterial and fungal biomass in soil. Biol. Fertil. Soils 22:59-65. https://doi.org/10.1007/BF00384433
  13. Grogan, D.W. and J.E. Cronan. 1997. Cyclopropane ring formation in membrane lipids of bacteria. Microbiol. Mol. Biol. Rev. 61:429-441.
  14. Guckert, J.B., M.A. Hood, and D.C. White. 1986. Phospholipid ester-linked fatty acid profile changes during nutrient deprivation of Vibrio cholerae: increases in cis/trans ratio and proportions of cyclopropyl fatty acid. Appl. Environ. Microbial. 52:794-801.
  15. Hamel, C., K. Hanson, F. Selles, A.F. Cruz, R. Lemke, B. McConkey, and R. Zentner. 2006. Seasonal and long-term resource-related variations in soil microbial communities in wheat-based rotations of the Canadian prairie. Soil Biol. Biochem. 38:2104-2116. https://doi.org/10.1016/j.soilbio.2006.01.011
  16. Ibekwe, A.M. and A.C. Kennedy. 1998. Fatty acid methyl ester (FAME) profiles as a tool to investigate community structure of two agricultural soils. Plant Soil 206:151-161. https://doi.org/10.1023/A:1004325124445
  17. Khalil, M.I., M.B. Hossain, and U. Schmidhalter. 2005. Carbon and nitrogen mineralization in different upland soils of the subtropics treated with organic materials. Soil Biol. Biochem. 37:1507-1518. https://doi.org/10.1016/j.soilbio.2005.01.014
  18. Kieft, T.L., E. Wilch, K. O'connor, D.B. Ringelberg, and D.C. White. 1997. Survival and phospholipid fatty acid profiles of surface and subsurface bacteria in natural sediment microcosms. Appl. Environ. Microbiol. 63:1531-1542.
  19. Lee, Y.H., B.K. Ahn, and J.H. Lee. 2010. Effects of rice straw application and green manuring on selected soil physical properties and microbial biomass carbon in no-till paddy field. Korean J. Soil Sci. Fert. 43:105-112.
  20. Lee, Y.H., D. Son, and Z.R. Choe. 2009. Effects of ricewinter cover crops cropping systems on the rice yield and quality in no-tillage paddy field. Korean J. Environ. Agri. 28:53-58. https://doi.org/10.5338/KJEA.2009.28.1.053
  21. Lee, Y.H., S.T. Lee, J.Y. Heo, M.G. Kim, K.P. Hong, W.D. Song, C.W. Rho, J.H. Lee, W.T. Jeon, B.G. Ko, K.A. Roh, and S.K. Ha. 2010. Monitoring of chemical properties from paddy soil in Gyeongnam Province. Korean J. Soil Sci. Fert. 43:140-146.
  22. Macalady, J.L., M.E. Fuller, and K.M. Scow. 1998. Effects of metam sodium fumigation on soil microbial activity and community structure. J. Environ. Qual. 27:54-63.
  23. Mac Rae, R.Y. and G.R. Mehuys. 1985. The effect of green manuring on the physical properties of temperate area soils. Adv. Soil Sci., Vol. 3. Springer-Verlag, Inc., NY, pp71-94.
  24. Miedaner, T., C. Reinbrecht, U. Lauber, M. Schollenberger, and H.H. Geiger. 2001. Effects of genotype and genotypeenvironment interaction on deoxynivalenol accumulation and resistance to Fusarium head blight in rye, triticale, and wheat. Plant Breeding 120:97-105. https://doi.org/10.1046/j.1439-0523.2001.00580.x
  25. NIAST. 2000. Methods of analysis of soil and plant. National Institute of Agricultural Science and Technology, Suwon, Korea (In Korean).
  26. Olsson, P.A., R. Francis, D.J. Read, and B. Soderstrom. 1998. Growth of arbuscular mycorrhizal mycelium in calcareous dune sand and its interaction with other soil micro-organisms as estimated by measurement of specific fatty acids. Plant Soil 201:9-16. https://doi.org/10.1023/A:1004379404220
  27. Park, T.I., J.H. Seo, O.K. Han, K.H. Park, J.S. Choi, J.G. Kim, J.C. Park, H.S. Kim, H.Y. Heo, S.B. Baek, Y.U. Kwon, H.H. Park, M.S. Kang, K.G. Park, and S.J. Suh. 2009. A new auricleless barley cultivar "Dami" for whole crop forage. Korean J. Breed. Sci. 41:349-353.
  28. Pankhurst, C.E., A. Pierret, B.G. Hawke, and J.M. Kirby. 2002. Microbiological and chemical properties of soil associated with macropores at different depths in a redduplex soil in NSW Australia. Plant soil 238:11-20. https://doi.org/10.1023/A:1014289632453
  29. Pennanen, T. 2001. Microbial communities in boreal coniferous forest humus exposed to heavy metals and changes in soil pH-a summary of the use of phospholipids fatty acids, $Biolog^{(R)}$ and 3H-Thymidine incorporation methods in field studies. Geoderma 100:91-126. https://doi.org/10.1016/S0016-7061(00)00082-3
  30. Rajendran, N., O. Matsuda, Y. Urushigawa, and U. Simidu. 1994. Characterization of microbial community structure in the surface sediment of Osaka Bay, Japan, by phospholipid fatty acid analysis. Appl. Environ. Microbiol. 60:248-257.
  31. Reganold, J.P., L.F. Elliott, and Y.L. Unger. 1987. Long-term effects of organic and conventional farming on soil erosion. Nature 330:370-372. https://doi.org/10.1038/330370a0
  32. Rillig, M.C., S.F. Wright, K.A. Nichols, W.F. Schmidt, and M.S. Torn. 2001. Large contribution of arbuscular mycorrhizal fungi to soil carbon pools in tropical forest soils. Plant Soil 233:167-177. https://doi.org/10.1023/A:1010364221169
  33. SAS. 2006. SAS enterprise guide Version 4.1. SAS Inst., Cary, NC.
  34. Schutter, M.E. and R.P. Dick. 2000. Comparison of fatty acid methyl ester (FAME) methods for characterizing microbial communities. Soil Sci. Soc. Am. J. 64:1659-1668. https://doi.org/10.2136/sssaj2000.6451659x
  35. Sttenworth, K.L., L.E. Jackson, F.J. Calderon, M.R. Stromberg, and K.M. Scow. 2003. Soil microbial community composition and land use history in cultivated and grassland ecosystems of coastal California. Soil. Biol. Biochem. 35:489-500. https://doi.org/10.1016/S0038-0717(03)00028-2
  36. Teasdale, J.R. and C.S.T. Daughtry. 1993. Weed suppression by live and desiccated hairy vetch (Vicia villosa). Weed Sci. 41:207-212
  37. Trinsoutrot, I., S. Recous, B. Bentz, M. Lineres, D. Cheneby, and B. Nicolardot. 2000. Biochemical quality of crop residues and carbon and nitrogen mineralization kinetics under nonlimiting nitrogen conditions. Soil Sci. Soc. Am. J. 64:918-926. https://doi.org/10.2136/sssaj2000.643918x
  38. Wright, S.F. and A. Upadhyaya. 1998. A survey of soils for aggregate stability and glomalin, a glycoprotein produced by hyphae of arbuscular mycorrhizal fungi. Plant Soil 198:97-107. https://doi.org/10.1023/A:1004347701584
  39. Zelles, L. 1997. Phospholipid fatty acid profiles in selected members of soil microbial communities. Chemosphere 35:275-294. https://doi.org/10.1016/S0045-6535(97)00155-0
  40. Zhang, C., X. Liu, F. Dong, J. Xu, Y. Zheng, and J. Li. 2010. Soil microbial communities response to herbicide 2,4-dichlorophenoxyacetic acid butyl ester. Eur. J. Soil Biol. 46:175-180. https://doi.org/10.1016/j.ejsobi.2009.12.005
  41. Zhong, W., T. Gu, W. Wang, B. Zhang, X. Lin, Q. Huang, and W. Shen. 2010. The effects of mineral fertilizer and organic manure on soil microbial community and diversity. Plant Soil 326:511-522. https://doi.org/10.1007/s11104-009-9988-y

Cited by

  1. Impacts of Soil Texture on Microbial Community from Paddy Soils in Gyeongnam Province vol.44, pp.6, 2011, https://doi.org/10.7745/KJSSF.2011.44.6.1176
  2. Effect of Green Manure Crops Incorporation for Reduction of Pythium zingiberum in Ginger Continuous Cultivation vol.28, pp.2, 2015, https://doi.org/10.7732/kjpr.2015.28.2.271
  3. Comparison of Microbial Community of Orchard Soils in Gyeongnam Province vol.44, pp.3, 2011, https://doi.org/10.7745/KJSSF.2011.44.3.492
  4. Effect of Bacillus subtilis S37-2 on Microorganisms in Soil and Growth of Lettuce (Lactuca sativa) vol.49, pp.5, 2016, https://doi.org/10.7745/KJSSF.2016.49.5.621
  5. Impacts of Soil Type on Microbial Community from Paddy Soils in Gyeongnam Province vol.44, pp.6, 2011, https://doi.org/10.7745/KJSSF.2011.44.6.1164
  6. Impacts of Topography on Microbial Community from Upland Soils in Gyeongnam Province vol.44, pp.3, 2011, https://doi.org/10.7745/KJSSF.2011.44.3.485
  7. Crop Rotation in Paddy Soil Exhibiting Crop Failure Following Replanting: Effect on Soil Chemical Properties, Soil Microbial Community and Growth Characteristics of 2-Year-Old Ginseng vol.24, pp.4, 2016, https://doi.org/10.7783/KJMCS.2016.24.4.294
  8. Effect of Biodegradable Mulch Film on Soil Microbial Community vol.49, pp.2, 2016, https://doi.org/10.7745/KJSSF.2016.49.2.125
  9. Impacts of Soil Organic Matter on Microbial Community of Paddy Soils in Gyeongnam Province vol.49, pp.6, 2016, https://doi.org/10.7745/KJSSF.2016.49.6.783
  10. Effects of organic matter sources on nitrogen supply potential in arable land vol.42, pp.4, 2015, https://doi.org/10.7744/cnujas.2015.42.4.431
  11. Effects of Electrical Conductivity on the Soil Microbial Community in a Controled Horticultural Land for Strawberry Cultivation vol.44, pp.5, 2011, https://doi.org/10.7745/KJSSF.2011.44.5.830
  12. Impacts of Soil Texture on Microbial Community of Orchard Soils in Gyeongnam Province vol.48, pp.2, 2015, https://doi.org/10.7745/KJSSF.2015.48.2.081
  13. Evaluation of Aquatic Animals on the Water in a Rice Field with No-tillage Rice Cover Crop Cropping Systems vol.44, pp.3, 2011, https://doi.org/10.7745/KJSSF.2011.44.3.371
  14. Relationship of Topography and Microbial Community from Paddy Soils in Gyeongnam Province vol.44, pp.6, 2011, https://doi.org/10.7745/KJSSF.2011.44.6.1158
  15. Comparison of Soil Microbial Communities to Different Practice for Strawberry Cultivation in Controlled Horticultural Land vol.44, pp.3, 2011, https://doi.org/10.7745/KJSSF.2011.44.3.479
  16. Analysis of Soil Microbial Communities Formed by Different Upland Fields in Gyeongnam Province vol.47, pp.2, 2014, https://doi.org/10.7745/KJSSF.2014.47.2.100
  17. Effects of Continuous Application of Green Manures on Microbial Community in Paddy Soil vol.48, pp.5, 2015, https://doi.org/10.7745/KJSSF.2015.48.5.528
  18. Variation of Microbial Communities with Crop Species in Controlled Horticultural Soils of Gyeongnam Province vol.46, pp.3, 2013, https://doi.org/10.7745/KJSSF.2013.46.3.182
  19. Variation of γ-Oryzanol by Incorporation of Green Manure Crops in Korean Rice Cultivars vol.47, pp.4, 2014, https://doi.org/10.7745/KJSSF.2014.47.4.275
  20. Assessment of Sustainable Production on Paddy Field Treated with Green Manure Crops Using Sustainability Index vol.47, pp.3, 2014, https://doi.org/10.7745/KJSSF.2014.47.3.165