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Structural Characterization of the J-domain of Tid1, a Mitochondrial Hsp40/DnaJ Protein

  • Sim, Dae-Won (Department of Biotechnology, Konkuk University) ;
  • Jo, Ku-Sung (Department of Biotechnology, Konkuk University) ;
  • Ryu, Kyoung-Seok (Division of Magnetic Resonance, Korea Basic Science Institute) ;
  • Kim, Eun-Hee (Division of Magnetic Resonance, Korea Basic Science Institute) ;
  • Won, Hyung-Sik (Department of Biotechnology, Konkuk University)
  • Received : 2012.05.07
  • Accepted : 2012.06.08
  • Published : 2012.06.20

Abstract

Tid1, belonging to the Hsp40/DnaJ family of proteins, functions as a cochaperone of cytosolic and mitochondrial Hsp70 proteins. In particular, the N-terminal J-domain of Tid1 (Tid1-JD) constitutes the major binding sites for proteinprotein interactions with client proteins, including p53, as well as its partner chaperone, Hsp70. In the present study, soluble, recombinant protein of Tid1-JD could be obtained by using the pCold vector system, and backbone NMR assignments were completed using the isotope $[^{13}C/^{15}N]$-enriched protein. Far-UV CD result implied that Tid1-JD is an ${\alpha}$-helical protein and the secondary structure determined using chemical shift data sets indentified four ${\alpha}$-helices with a loop region containing the HPD (conserved tripeptide of His, Pro and Asp) motif. Additionally, NMR spectra under different conditions implied that the HPD motif, which is a critical region for protein-protein interactions of Tid1-JD, would possess dynamic properties.

Keywords

References

  1. H. H. Kampinga, E. A. Elizabeth, Nat. Rev. Mol. Cell. Biol. 11, 579 (2010). https://doi.org/10.1038/nrm2941
  2. X. B. Qiu, Y. M. Shao, S. Miao, L. Wang, Cell. Mol. Life. Sci. 63, 2560 (2006). https://doi.org/10.1007/s00018-006-6192-6
  3. P. Genevaux, C. Georgopoulos, W.L. Kelley, Mol. Microbiol. 66, 840 (2007). https://doi.org/10.1111/j.1365-2958.2007.05961.x
  4. A. Ahmad, A. Bhattacharya, R.A. Mcdonald, M. Cordes, B. Ellington, E.B. Bertelsen, E.R. Zuiderweg, Proc. Natl. Acad. Sci. USA 108, 18966 (2011). https://doi.org/10.1073/pnas.1111220108
  5. Li. Jingzhi, X. Quian, B. Sha, Protein Pept. Lett. 6, 606 (2009).
  6. F. Hennessy, W. S. Nicoll, R. Zimmermann, M. E. Cheetham, G. L. Blatch, Protein Sci. 14, 1697 (2005). https://doi.org/10.1110/ps.051406805
  7. J. Syken, T. De-Medina, K. Münger, Proc. Natl. Acad. Sci. USA 96, 8499 (1999). https://doi.org/10.1073/pnas.96.15.8499
  8. J. Proft, J. Faraji, J. C. Robbins, F. C. Zucchi, X. Zhao, G. A. Metz, J. E. Braun, PLoS One 6, e26045 (2011). https://doi.org/10.1371/journal.pone.0026045
  9. B. Lu, N. Garrido, J. N. Spelbrink, C. K. Suzuki, J. Biol. Chem. 281, 13150 (2006). https://doi.org/10.1074/jbc.M509179200
  10. O. Iosefson, S. Sharon, P. Goloubinoff, A. Azem, Cell. Stress Chaperones 17, 57 (2011).
  11. L. N. Diane, A. N. Elwi, S.-W. Kim, Oncotaget 1, 396 (2010). https://doi.org/10.18632/oncotarget.173
  12. B. Y. Ahn, D. L. Zajchowski, B. Lee, A. N. Elwi, S. -W. Kim, Oncotarget 29, 1155 (2010).
  13. O. Iosefson, A. Azem, FEBS Lett. 584, 1080 (2010). https://doi.org/10.1016/j.febslet.2010.02.019
  14. H. -S. Won, S. -H. Park, H. -E. Kim, H. -E. Kim, B. Hyun, M. Kim, B. -J. Lee, B. -J. Kim, Eur. J. Biochem. 269, 4367 (2002). https://doi.org/10.1046/j.1432-1033.2002.03139.x
  15. D. -W. Sim, H. -C. Ahn, H. -S. Won, J. Korean. Magn. Reson. Soc. 13, 108 (2009). https://doi.org/10.6564/JKMRS.2009.13.2.108
  16. D. S. Wishart, B. D. Sykes, F. M. Richards, Biochemistry 31, 1647 (1992). https://doi.org/10.1021/bi00121a010
  17. D. S. Wishart, B. D. Sykes, J. Biomol. NMR 4, 171 (1994).
  18. Y. Shen, F. Delaqlio, G. Cornilescu, A. Bax, J. Biomol. NMR 44, 213 (2009). https://doi.org/10.1007/s10858-009-9333-z
  19. Y. -S. Lee, K. -S. Ryu, Y. Lee, S. Kim, K. -W. Lee, H. -S. Won, J. Korean. Magn. Reson. Soc. 15,137 (2011). https://doi.org/10.6564/JKMRS.2011.15.2.137
  20. H. -S. Won, T. Yamazaki, T. -W. Lee, M. -K. Yoon, S. -H. Park, Y. Kyogoku, B. -J. Lee, Biochemistry 39, 13953 (2000). https://doi.org/10.1021/bi000012x

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