Acknowledgement
Supported by : 한국연구재단
References
- http://www.genome.gov/sequencingcosts/ (retrieved on Jul. 4, 2012)
- http://www.genome.gov/12513210/ (retrieved on Jul. 4, 2012)
- P. K. Gupta, "Single-molecule DNA sequencing technologies for future genomics research", Trends in Biotechnology, Vol. 26, pp. 602-611, 2008. https://doi.org/10.1016/j.tibtech.2008.07.003
- E. R. Mardis, "Next-generation DNA sequencing methods", Annual Review of Genomics and Human Genetics, Vol. 9, pp. 387-402, 2008. https://doi.org/10.1146/annurev.genom.9.081307.164359
- M. L. Metzker, "Sequencing technologies the next generation", Nature Reviews Genetics, Vol. 11, pp. 31-46, 2010. https://doi.org/10.1038/nrg2626
- B. M. Venkatesan and R. Bashir, "Nanopore sensors for nucleic acid analysis", Nature Nanotechnology, Vol. 6, pp. 615-624, 2010. https://doi.org/10.1038/nchembio.406
- A. Kahvejian, J. Quackenbush, and J. F. Thompson, "What would you do if you could sequence everything?", Nature Biotechnology, Vol. 26, pp. 1125-1133, 2008. https://doi.org/10.1038/nbt1494
- B. Luan, G. Stolovitzky, and G. Martyna, "Slowing and controlling the translocation of DNA in a solidstate nanopore", Nanoscale, Vol. 4, pp. 1068-1077, 2012. https://doi.org/10.1039/c1nr11201e
- Y. Astier, O. Braha, and H. Bayley, "Toward single molecule DNA sequencing: Direct identification of ribonucleoside and deoxyribonucleoside 5'- monophosphates by using an engineered protein nanopore equipped with a molecular adapter", Journal of the American Chemical Society, Vol. 128, pp. 1705-1710, 2006. https://doi.org/10.1021/ja057123+
- J. Clarke, H. C. Wu, L. Jayasinghe, A. Patel, S. Reid, and H. Bayley, "Continuous base identification for single-molecule nanopore DNA sequencing", Nature Nanotechnology, Vol. 4, pp. 265-270, 2009. https://doi.org/10.1038/nnano.2009.12
- I. M. Derrington, T. Z. Butler, M. D. Collins, E. Manrao, M. Pavlenok, M. Niederweis, and J. H. Gundlach, "Nanopore DNA sequencing with MspA", PNAS, Vol. 107, pp. 16060-16065, 2010. https://doi.org/10.1073/pnas.1001831107
- X. Liang and S. Y. Chou, "Nanogap detector inside nanofluidic channel for fast real-time label-free DNA analysis", Nano Letters, Vol. 8, pp. 1472- 1476, 2008. https://doi.org/10.1021/nl080473k
- H. W. Ch Postma, "Rapid sequencing of individual DNA molecules in graphene nanogaps", Nano Letters, Vol. 10, pp. 420-425, 2010. https://doi.org/10.1021/nl9029237
- A. Singer, M. Wanunu, W. Morrison, H. Kuhn, M. Frank-Kamenetskii, and A. Meller, "Nanopore based sequence specific detection of duplex DNA for genomic profiling", Nano Letters, Vol. 10, pp. 738-742, 2010. https://doi.org/10.1021/nl100058y
- A. J. Storm, J. H. Chen, X. S. Ling, H. W. Zandbergen, and C. Dekker, "Fabrication of solidstate nanopores with single-nanometre precision", Nature Materials, Vol. 2, pp. 537-540, 2003. https://doi.org/10.1038/nmat941
-
B. M. Venkatesan, A. B. Shah, J. M. Zuo, and R. Bashir, "DNA sensing using nanocrystalline surface-enhanced
$Al_{2}O_{3}$ nanopore sensors", Advanced Functional Materials, Vol. 20, pp. 1266- 1275, 2010. https://doi.org/10.1002/adfm.200902128 - H. Liu, J. He, J. Tang, P. Pang, D. Cao, P. Krstic, S. Joseph, S. Lindsay, and C. Nuckolls, "Translocation of single-stranded DNA through single-walled carbon nanotubes", Science, Vol. 327, pp. 64-67, 2010. https://doi.org/10.1126/science.1181799
- R. Fan, R. Karnik, M. Yue, D. Li, A. Majumdar, and P. Yang, "DMA translocation in inorganic nanotubes", Nano Letters, Vol. 5, pp. 1633-1637, 2005. https://doi.org/10.1021/nl0509677
- K. Healy, B. Schiedt, and I. P. Morrison, "Solidstate nanopore technologies for nanopore-based DNA analysis", Nanomedicine, Vol. 2, pp. 875-897, 2007. https://doi.org/10.2217/17435889.2.6.875
- B. M. Venkatesan, B. Dorvel, S. Yemenicioglu, N. Watkins, I. Petrov, and R. Bashir, "Highly sensitive, mechanically stable nanopore sensors for DNA analysis", Advanced Materials, Vol. 21, pp. 2771- 2776, 2009. https://doi.org/10.1002/adma.200803786
- J. Li, D. Stein, C. McMullan, D. Branton, M. J. Aziz, and J. A. Golovchenko, "Ion-beam sculpting at nanometre length scales", Nature, Vol. 412, pp. 166-169, 2001. https://doi.org/10.1038/35084037
- C. J. Russo and J. A. Golovchenko, "Atom-by-atom nucleation and growth of graphene nanopores", PNAS, Vol. 109, pp. 5953-5957, 2012. https://doi.org/10.1073/pnas.1119827109
- S. Garaj, W. Hubbard, A. Reina, J. Kong, D. Branton, and J. A. Golovchenko, "Graphene as a subnanometre trans-electrode membrane", Nature, Vol. 467, pp. 190-193, 2010. https://doi.org/10.1038/nature09379
- G. F. Schneider, S. W. Kowalczyk, V. E. Calado, G. Pandraud, H. W. Zandbergen, L. M. K. Vandersypen, and C. Dekker, "DNA translocation through graphene nanopores", Nano Letters, Vol. 10, pp. 3163-3167, 2010. https://doi.org/10.1021/nl102069z
- B. Song, G. F. Schneider, Q. Xu, G. Pandraud, C. Dekker, and H. Zandbergen, "Atomic-scale electronbeam sculpting of near-defect-free graphene nanostructures", Nano Letters, Vol. 11, pp. 2247- 2250, 2011. https://doi.org/10.1021/nl200369r
-
A. R. Hall, A. Scott, D. Rotem, K. K. Mehta, H. Bayley, and C. Dekker, "Hybrid pore formation by directed insertion of
$\alpha$ -haemolysin into solid-state nanopores", Nature Nanotechnology, Vol. 5, pp. 874-877, 2010. https://doi.org/10.1038/nnano.2010.237 - S. M. Iqbal, D. Akin, and R. Bashir, "Solid-state nanopore channels with DNA selectivity", Nature Nanotechnology, Vol. 2, pp. 243-248, 2007. https://doi.org/10.1038/nnano.2007.78
- T. Nelson, B. Zhang, and O. V. Prezhdo, "Detection of nucleic acids with graphene nanopores: Ab initio characterization of a novel sequencing device", Nano Letters, Vol. 10, pp. 3237-3242, 2010. https://doi.org/10.1021/nl9035934
- M. Tsutsui, M. Taniguchi, K. Yokota, and T. Kawai, "Identifying single nucleotides by tunnelling current", Nature Nanotechnology, Vol. 5, pp. 286- 290, 2010. https://doi.org/10.1038/nnano.2010.42
- S. K. Min, W. Y. Kim, Y. Cho, and K. S. Kim, "Fast DNA sequencing with a graphene-based nanochannel device", Nature Nanotechnology, Vol. 6, pp. 162-165, 2011. https://doi.org/10.1038/nnano.2010.283
- J. K. Rosenstein, M. Wanunu, C. A. Merchant, M. Drndic, and K. L. Shepard, "Integrated nanopore sensing platform with sub-microsecond temporal resolution", Nature Methods, Vol. 9, pp. 487-492,2012. https://doi.org/10.1038/nmeth.1932
- M. Tsutsui, M. Taniguchi, and T. Kawai, "Fabrication of 0.5 nm electrode gaps using self-breaking technique", Applied Physics Letters, Vol. 93, 2008.
- http://www.ks.uiuc.edu/ (retrieved on Jul. 10, 2012)