DOI QR코드

DOI QR Code

Interaction of XRCC1 and XPD Gene Polymorphisms with Lifestyle and Environmental Factors Regarding Susceptibility to Lung Cancer in a High Incidence Population in North East India

  • Published : 2014.03.01

Abstract

Background: This study aimed to explore the role of XRCC1 (Arg399Gln) and XPD (Lys751Gln) gene polymorphisms, lifestyle and environmental factors as well as their possible interactions in propensity to develop lung cancer in a population with high incidence from North East India. Materials and Methods: A total of 272 lung cancer cases and 544 controls were collected and XRCC1 (Arg399Gln) and XPD (Lys751Gln) genotypes were analyzed using a polymerase chain reaction based restriction fragment length polymorphism assay. Conditional multiple logistic regression analysis was used to calculate adjusted odds ratios and 95% confidence intervals after adjusting for confounding factors. Results: The combined Gln/Gln genotype of XRCC1 and XPD genes (OR=2.78, CI=1.05-7.38; p=0.040) was significantly associated with increased risk for lung cancer. Interaction of XRCC1Gln/Gln genotype with exposure of wood combustion (OR=2.56, CI=1.16-5.66; p=0.020), exposure of cooking oil fumes (OR=3.45, CI=1.39-8.58; p=0.008) and tobacco smoking (OR=2.54, CI=1.21-5.32; p=0.014) and interaction of XPD with betel quid chewing (OR=2.31, CI=1.23-4.32; p=0.009) and tobacco smoking (OR=2.13, CI=1.12-4.05; p=0.022) were found to be significantly associated with increased risk for lung cancer. Conclusions: Gln/Gln alleles of both XRCC1 and XPD genes appear to amplify the effects of household exposure, smoking and betel quid chewing on lung cancer risk in the study population.

Keywords

References

  1. Berwick M, Vineis P (2000). Markers of DNA Repair and Susceptibility to Cancer in Humans: an Epidemiologic Review. J Natl Cancer Inst, 92, 874-97. https://doi.org/10.1093/jnci/92.11.874
  2. Coin F, Bergmann E, Tremeau-Bravard A, et al (1999). Mutations in XPB and XPD helicases found in xerodermapigmentosum patients impair the transcription function of TFIIH. The EMBO Journal, 18, 1357-66. https://doi.org/10.1093/emboj/18.5.1357
  3. David-Beabes GL, Lunn RM, London SJ (2001). No association between the xpd (lys751g1n). polymorphism or the xrcc3 (thr241met). polymorphism and lung cancer risk. Cancer Epidemiol Biomarkers Prev, 10, 911-2.
  4. De Ruyck K, Szaumkessel M, De Rudder I,et al (2007). Polymorphisms in base-excision repair andnucleotideexcision repair genes in relation to lung cancer risk. Mutat Res, 631, 101-10. https://doi.org/10.1016/j.mrgentox.2007.03.010
  5. Ferlay J, Shin HR, Bray F, et al (2010). Estimates of worldwide burden of cancer in 2008: GLOBOCAN 2008. Int J Cancer, 127, 2893-917. https://doi.org/10.1002/ijc.25516
  6. Ferlay J, Shin HR, Bray F, et al (2010). Cancer Incidence and Mortality Worldwide: IARC Cancer Base No. 10 [Internet]. Lyon, France: International Agency for Research on Cancer.
  7. GLOBOCAN, 2008 [October, 2012; 2011 20 June] Available from: http://globocan.iarc.fr.
  8. Hosgood HD, Boffetta P, Greenland S, et al (2010). In-home coal and wood use and lung cancer risk: a pooled analysisof the international lung cancer consortium. Environ Health Perspect, 118, 1743-7. https://doi.org/10.1289/ehp.1002217
  9. Huang G, Cai S, Wang W, et al (2008). Association between xrcc1 and xrcc3 polymorphisms with lung cancer risk: a meta-analysis from case-control studies. Plos One, 8, 68457.
  10. Hung HS, Wu WJ, Cheng YW, et al (2007). Association of cooking oil fumes exposure with lung cancer: involvement of inhibitor of apoptosis proteins in cell survival and proliferation in vitro. Mutat Res, 628, 107-16. https://doi.org/10.1016/j.mrgentox.2006.12.005
  11. Improta G, Sgambato A, Bianchino G, et al (2008). Polymorphisms of the DNA Repair Genes XRCC1 and XRCC3 and Risk of Lung and Colorectal Cancer: A Case-Control Study in a Southern Italian Population. Anticancer Research, 28, 2941-6.
  12. Karkucak M, Yakut T, Evrensel T, et al (2012). XRCC1 gene polymorphisms and risk of lung cancer in Turkish patients. Int J Hum Genet, 12, 113-7.
  13. Landi S, Gemignani F, Canzian F, et al (2006). DNA Repair and Cell Cycle Control Genes and the Risk of Young-Onset Lung Cancer. Cancer Res, 66, 11062-9. https://doi.org/10.1158/0008-5472.CAN-06-1039
  14. Li M, Yin Z, Guan P, et al (2008). XRCC1 polymorphisms, cooking oil fume andlung cancer in Chinese women nonsmokers. Lung Cancer, 62, 145-51. https://doi.org/10.1016/j.lungcan.2008.03.002
  15. Li XD, Han JC, Zhang YJ, Li HB, Wu XY (2013). Common variations of DNA repair genes are associated with response to platinum-based chemotherapy in NSCLCs. Asian Pac J Cancer Prev, 14, 145-8. https://doi.org/10.7314/APJCP.2013.14.1.145
  16. Li Z, Guan W, Li MX, et al (2011). Genetic polymorphism of DNA base-excision repair genes (APE1, OGG1 and XRCC1). and their correlation with risk of lung cancer in a Chinese population. Arch Med Res, 42, 226-34. https://doi.org/10.1016/j.arcmed.2011.04.005
  17. Lopez-Cima MF, Gonzalez-Arriaga P, Garcia-Castro L, et al (2007). Polymorphisms in XPC, XPD, XRCC1 and XRCC3 DNA repair genes and lung cancer risk in a population of Northern Spain. BMC Cancer, 7, 162. https://doi.org/10.1186/1471-2407-7-162
  18. Lunn RM, Langlois RG, Hsieh LL, et al (1999). XRCC1 Polymorphisms: Effects on Aflatoxin B1-DNA Adductsand Glycophorin A Variant Frequency. Cancer Res, 59, 2557-61.
  19. Mandal SK, Singh TT, Sharma TD, Amrithalingam V (2013). Clinico-pathology of Lung Cancer in a Regional Cancer Center in Northeastern India. Asian Pac J Cancer Prev, 14, 7277-81. https://doi.org/10.7314/APJCP.2013.14.12.7277
  20. Maynard S, Schurman SH, Harboe C, et al (2009). Base excision repair of oxidative DNA damage and association with cancer and aging. Carcinogenesis, 30, 2-10.
  21. Mutairi FMA, Alanazi M, Shalaby M, et al (2013). Association of XRCC1 gene polymorphisms with breast cancer susceptibility in Saudi Patients. Asian Pac J Cancer Prev, 14, 3809-13. https://doi.org/10.7314/APJCP.2013.14.6.3809
  22. Natukula K, Jamil K, Pingali UR, Attili VSS, Madireddy URN (2013). The Codon 399 Arg/Gln XRCC1 Polymorphism is Associated with Lung Cancer in Indians. Asian Pac J Cancer Prev, 14, 5275-9. https://doi.org/10.7314/APJCP.2013.14.9.5275
  23. NCRP (2013). National Cancer Registry Programme, Three-year report of the population based cancer registries 2009-2011, (Incidence and Distribution of Cancer: Report of 25 PBCRs in India). Indian Council of Medical Research, Bangalore, India, pp 154-79.
  24. Park JY, Lee SY, Jeon H, et al (2002). Polymorphism of the DNA repair gene XRCC1 and risk of primary lung cancer. Cancer Epidemiol Biomarkers Prev, 11, 23-7.
  25. Pfeifer GP, Denissenko MF, Olivier M, et al (2002). Tobacco smoke carcinogens, DNA damage and p53 mutations insmoking-associated cancers. Oncogene, 21, 7435-51. https://doi.org/10.1038/sj.onc.1205803
  26. Phukan RK, Ali MS, Chetia CK, Mahanta J (2001). Betel nut and tobacco chewing; potential risk factors of cancer of oesophagus in Assam, India. Brit J Cancer, 85, 661-7. https://doi.org/10.1054/bjoc.2001.1920
  27. Phukan RK, Narain K, Zomawia E, Hazarika NC, Mahanta J (2006). Dietary habits and stomach cancer in Mizoram, India. J Gastroenterol, 41, 418-24. https://doi.org/10.1007/s00535-006-1761-x
  28. Phukan RK, Zomawia E, Narain K, Hazarika NC, Mahanta J (2005). Tobacco use and stomach cancer in Mizoram, India. Cancer Epidemiol Biomarkers Prev, 14, 1892-6. https://doi.org/10.1158/1055-9965.EPI-05-0074
  29. Pramanik S, Devi S, Chowdhary S, et al (2011). DNA repair gene polymorphisms at XRCC1, XRCC3, XPD, and OGG1 loci in Maharashtrian population of central India. Chemosphere, 82, 941-6. https://doi.org/10.1016/j.chemosphere.2010.10.100
  30. Qiao Y, Spitz MR, Shen H, et al (2002). Modulation of repair of ultraviolet damage in the host-cell reactivation assay by polymorphic XPC and XPD/ERCC2 genotypes. Carcinogenesis, 23, 295-9. https://doi.org/10.1093/carcin/23.2.295
  31. Seow A, Poh W, The M, et al (2000). Fumes from meat cooking and lung cancer risk in Chinese women. Cancer Epidemiol Biomarkers Prev, 9, 1215-21.
  32. Shen MR, Jones IM, Mohrenweiser H (1998). Nonconservative amino acid substitution variants exist at polymorphic frequency in DNA repair genes in healthy humans. Cancer Res, 58, 604-8.
  33. Sterpone S, Cozzi R (2010). Influence of XRCC1 genetic polymorphisms on ionizing radiation-induced DNA damage and repair. J Nucleic Acids, 10, 1-6.
  34. Sun Y, Zhang YJ, Kong XM (2013). No association of XRCC1 and CLPTM1L polymorphisms with non-small cell lung cancer in a non-smoking Han Chinese population. Asian Pac J Cancer Prev, 14, 5171-4. https://doi.org/10.7314/APJCP.2013.14.9.5171
  35. Tang L, Lim W, Eng P, et al (2010). Lung Cancer in Chinese Women: Evidence for an Interaction between Tobacco Smoking and Exposure to Inhalants in the Indoor Environment. Environ Health Perspect, 118, 1257-60. https://doi.org/10.1289/ehp.0901587
  36. Vettriselvi V, Vijayalakshmi K, Paul SFD, et al (2007). XRCC1 and XPD Gene Polymorphisms in a South Indian Population. Asian Pac J Cancer Prev, 8, 283-6.
  37. Wang L, Chen Z, Wang Y, et al (2014). The association of c.1471G>A genetic polymorphism in XRCC1 gene with lung cancer susceptibility in Chinese Han population. Tumour Biol. [Epub ahead of print]
  38. Yin Z, Zhou B, He Q, et al (2009). Association between polymorphisms in DNA repair genes and survival of nonsmoking female patients with lung adenocarcinoma. BMC Cancer, 9, 439. https://doi.org/10.1186/1471-2407-9-439
  39. Zheng W, Lee S (2009). Well-done Meat Intake, Heterocyclic Amine Exposure, and Cancer Risk. Nutr Cancer, 61, 437-46. https://doi.org/10.1080/01635580802710741
  40. Zhou M, Wan HY, Gao BL, Ding YJ, Jun RX (2012). Genetic polymorphisms of XPD and CDA and lung cancer risk. Oncol Lett, 4, 247-51.

Cited by

  1. Descriptive Report on Pattern of Variation in Cancer Cases within Selected Ethnic Groups in Kamrup Urban District of Assam, 2009-2011 vol.15, pp.15, 2014, https://doi.org/10.7314/APJCP.2014.15.15.6381
  2. Interaction between Polymorphisms in Pre-MiRNA Genes and Cooking Oil Fume Exposure on the Risk of Lung Cancer in Chinese Non-Smoking Female Population vol.10, pp.6, 2015, https://doi.org/10.1371/journal.pone.0128572
  3. Geographic trends of tobacco-related cancers in Cyprus vol.13, pp.1, 2015, https://doi.org/10.1186/s12971-015-0048-5
  4. Association of a p53 Codon 72 Gene Polymorphism with Environmental Factors and Risk of Lung Cancer: a Case Control Study in Mizoram and Manipur, a High Incidence Region in North East India vol.15, pp.24, 2015, https://doi.org/10.7314/APJCP.2014.15.24.10653
  5. Interaction of Tobacco Smoking and Chewing with Angiotensin Converting Enzyme (Insertion/Deletion) Gene Polymorphisms and Risk of Lung Cancer in a High Risk Area from Northeast India vol.15, pp.24, 2014, https://doi.org/10.7314/APJCP.2014.15.24.10691
  6. Note of clarification of data in the paper titled X-ray repair cross-complementing group 1 codon 399 polymorphism and lung cancer risk: an updated meta-analysis vol.36, pp.5, 2015, https://doi.org/10.1007/s13277-015-3384-4
  7. Association of DNA repair and xenobiotic pathway gene polymorphisms with genetic susceptibility to gastric cancer patients in West Bengal, India vol.37, pp.7, 2016, https://doi.org/10.1007/s13277-015-4780-5
  8. The XRCC 1 DNA repair gene modifies the environmental risk of stomach cancer: a hospital-based matched case-control study vol.17, pp.1, 2017, https://doi.org/10.1186/s12885-017-3675-9
  9. Association of 12 polymorphic variants conferring genetic risk to lung cancer in Indian population: An extensive meta-analysis vol.58, pp.9, 2017, https://doi.org/10.1002/em.22149
  10. Genetic Variant Arg399Gln G>A of XRCC1 DNA Repair Gene Enhanced Cancer Risk Among Indian Population: Evidence from Meta-analysis and Trial Sequence Analyses pp.0974-0422, 2017, https://doi.org/10.1007/s12291-017-0669-y