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Characterization and Pathogenicity of Alternaria burnsii from Seeds of Cucurbita maxima (Cucurbitaceae) in Bangladesh

  • Paul, Narayan Chandra (Division of Food Technology, Biotechnology & Agrochemistry, College of Agriculture & Life Sciences, Chonnam National University) ;
  • Deng, Jian Xin (Department of Plant Protection, College of Agriculture, Yangtze University) ;
  • Lee, Hyang Burm (Division of Food Technology, Biotechnology & Agrochemistry, College of Agriculture & Life Sciences, Chonnam National University) ;
  • Yu, Seung-Hun (Division of Food Technology, Biotechnology & Agrochemistry, College of Agriculture & Life Sciences, Chonnam National University)
  • Received : 2015.07.08
  • Accepted : 2015.10.12
  • Published : 2015.12.31

Abstract

In the course of survey of endophytic fungi from Bangladesh pumpkin seeds in 2011~2012, two strains (CNU111042 and CNU111043) with similar colony characteristics were isolated and characterized by their morphology and by molecular phylogenetic analysis of the internal transcribed spacer, glyceraldehydes-3-phosphate dehydrogenase (gpd), and Alternaria allergen a1 (Alt a1) sequences. Phylogenetic analysis of all three sequences and their combined dataset revealed that the fungus formed a subclade within the A. alternata clade, matching A. burnsii and showing differences with its other closely related Alternaria species, such as A. longipes, A. tomato, and A. tomaticola. Long ellipsoid, obclavate or ovoid beakless conidia, shorter and thinner conidial size ($16{\sim}60[90]{\times}6.5{\sim}14[{\sim}16]{\mu}m$) distinguish this fungus from other related species. These isolates showed more transverse septation (2~11) and less longitudinal septation (0~3) than did other related species. Moreover, the isolate did not produce any diffusible pigment on media. Therefore, our results reveal that the newly recorded fungus from a new host, Cucurbita maxima, is Alternaria burnsii Uppal, Patel & Kamat.

Keywords

References

  1. Final report on 'Pest risk analysis (PRA) of citrus & cucurbits in Bangladesh and listing quarantine pests'. Savar: Department of Agricultural Extension, Government of the People's Republic of Bangladesh; 2010.
  2. Nees von Esenbeck CG. Das system der pilze and schwamme. Wuzburg: In der Stahelschen Buchhandlung; 1817. p. 234.
  3. Simmons EG. Alternaria: an identification manual. Utrecht: CBS Fungal Biodiversity Centre; 2007.
  4. Kucharek T. Alternaria diseases of crucifers. Gainesville (FL): Florida Cooperative Extension Service, University of Florida; 1994. p. 34.
  5. Thomma BP. Alternaria spp.: from general saprophyte to specific parasite. Mol Plant Pathol 2003;4:225-36. https://doi.org/10.1046/j.1364-3703.2003.00173.x
  6. Wu WS, Wu HC, Li YL. Potential of Bacillus amyloliquefaciens for control of Alternaria cosmosa and A. patula of Cosmos sulfurous (Yellow Cosmos) and Tagetes patula (French Marigold). J Phytopathol 2007;155:670-5. https://doi.org/10.1111/j.1439-0434.2007.01293.x
  7. Wu WS, Li YL. A new species of Alternaria on cosmos seeds. Mycotaxon 2005;91:15-20.
  8. Mohsan M, Intizar-ul-Hassan M, Ali L. Chemotheraptic management of Alternaria black spot (Alternaria alternata) in mango fruits. J Agric Res 2011;49:499-506.
  9. Prusky D, Fuchs Y, Yanko U. Assessment of latent infections as a basis for control of postharvest disease of mango. Plant Dis 1983;67:816-8. https://doi.org/10.1094/PD-67-816
  10. Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG. The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 1997;25:4876-82. https://doi.org/10.1093/nar/25.24.4876
  11. Rotem J. The genus Alternaria: biology, epidemiology, and pathogenicity. St. Paul (MN): APS Press; 1994.
  12. Petrini O, Fisher PJ. A comparative study of fungal endophytes in xylem and whole stem of Pinus silvestris and Fagus sylvatica. Trans Br Mycol Soc 1988;91:233-8. https://doi.org/10.1016/S0007-1536(88)80210-9
  13. Kurandawad JM, Lakshman HC. Studies on endophytic fungal diversity in some important medicinal plants of the botanical garden: a report. J Theor Exp Biol 2011;8:45-51.
  14. Mostert L, Crous PW, Petrini O. Endophytic fungi associated with shoots and leaves of Vitis vinifera, with specific reference to the Phomopsis viticola complex. Sydowia 2000;52:46-58.
  15. Paul NC, Deng JX, Sang HK, Choi YP, Yu SH. Distribution and antifungal activity of endophytic fungi in different growth stages of chili pepper (Capsicum annuum L.) in Korea. Plant Pathol J 2012;28:10-9. https://doi.org/10.5423/PPJ.OA.07.2011.0126
  16. Joly P. Le Genre Alternaria: recherches physiologiques, biologiques et systematiques. Encyclopedie Mycologique. Paris: Paul Lechevalier; 1964.
  17. Neergaard P. Danish species of Alternaria and Stemphylium: taxonomy, parasitism, economical significance. Copenhagen: Einar Munksgard; 1945.
  18. Yu SH. Korean Species of Alternaria and Stemphylium. Suwon: National Institute of Agricultural Science and Technology; 2001.
  19. Zhang TY. Flora Fungorum Sinicorum. Vol. 16. Alternaria. Beijing: Science Press; 2003.
  20. Uchida JY, Aragaki M, Yoshimura MA. Alternaria leaf spots of Brassaia actinophylla, Dizygotheca elegantissima, and Tupidanthus calyptratus. Plant Dis 1984;68:447-9. https://doi.org/10.1094/PD-68-447
  21. Harteveld DO, Akinsanmi OA, Drenth A. Multiple Alternaria species groups are associated with leaf blotch and fruit spot diseases of apple in Australia. Plant Pathol 2013;62:289-97. https://doi.org/10.1111/j.1365-3059.2012.02637.x
  22. Hong SG, Cramer RA, Lawrence CB, Pryor BM. Alt a1 allergen homologs from Alternaria and related taxa: analysis of phylogenetic content and secondary structure. Fungal Genet Biol 2005;42:119-29. https://doi.org/10.1016/j.fgb.2004.10.009
  23. Kang JC, Crous PW, Mchau GR, Serdani M, Song SM. Phylogenetic analysis of Alternaria spp. associated with apple core rot and citrus black rot in South Africa. Mycol Res 2002;106:1151-62. https://doi.org/10.1017/S0953756202006524
  24. Kusaba M, Tsuge T. Nuclear ribosomal RNA variation and pathogenic specialization in Alternaria fungi known to produce host-specific toxins. Appl Environ Microbiol 1994; 60:3055-62.
  25. Peever TL, Su G, Carpenter-Boggs L, Timmer LW. Molecular systematics of citrus-associated Alternaria species. Mycologia 2004;96:119-34. https://doi.org/10.2307/3761993
  26. Yu SH, Cho HS, Kim BR, Park MS. Morphological and molecular characterization of Alternaria isolates from solanaceous crops. Kor J Mycol 2003;31:103-13. https://doi.org/10.4489/KJM.2003.31.2.103
  27. Deng JX. Molecular, morphological, and pathogenic characterization of Alternaria panax from different Araliaceae plants [dissertation]. Daejeon: Chungnam National University; 2009.
  28. Paul NC, Kim WK, Woo SK, Park MS, Yu SH. Diversity of endophytic fungi associated with Taraxacum coreanum and their antifungal activity. Mycobiology 2006;34:185-90. https://doi.org/10.4489/MYCO.2006.34.4.185
  29. White TJ, Bruns T, Lee S, Taylor J. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ, editors. PCR protocols: a guide to methods and applications. San Diego (CA): Academic Press; 1990. p. 315-22.
  30. Berbee ML, Pirseyedi M, Hubbard S. Cochliobolus phylogenetics and the origin of known, highly virulent pathogens, inferred from ITS and glyceraldehydes-3-phosphate dehydrogenase gene sequences. Mycologia 1999;91:964-77. https://doi.org/10.2307/3761627
  31. Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S. MEGA5: Molecular Evolutionary Genetics Analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 2001;28:2731-9.
  32. Park MS, Romanoski CE, Pryor BM. A re-examination of the phylogenetic relationship between the causal agents of carrot black rot, Alternaria radicina and A. carotiincultae. Mycologia 2008;100:511-27. https://doi.org/10.3852/07-186R1
  33. Gannibal PB. Taxonomic studies of Alternaria from Russia: new species on Asteraceae. Mycotaxon 2010;114:109-14. https://doi.org/10.5248/114.109
  34. Martinez SP, Snowdon R, Pons-Kuhnemann J. Variability of Cuban and international populations of Alternaria solani from different hosts and localities: AFLP genetic analysis. Eur J Plant Pathol 2004;110:399-409. https://doi.org/10.1023/B:EJPP.0000021071.65146.c0
  35. Lawrence DP, Park MS, Pryor BM. Nimbya and Embellisia revisited, with nov. comb for Alternaria celosiae and A. perpunctulata. Mycol Prog 2012;11:799-815. https://doi.org/10.1007/s11557-011-0793-7
  36. Pryor BM, Bigelow DM. Molecular characterization of Embellisia and Nimbya species and their relationship to Altenraria, Ulocladium and Stemphylium. Mycologia 2003;95: 1141-54. https://doi.org/10.2307/3761916
  37. Pryor BM, Michailides TJ. Morphological, pathogenic, and molecular characterization of Alternaria isolates associated with Alternaria late blight of pistachio. Phytopathology 2002; 92:406-16. https://doi.org/10.1094/PHYTO.2002.92.4.406
  38. Andrew M, Peever TL, Pryor BM. An expanded multilocus phylogeny does not resolve morphological species within the small-spored Alternaria species complex. Mycologia 2009; 101:95-109. https://doi.org/10.3852/08-135
  39. Roberts RG, Reymond ST, Andersen B. RAPD fragment pattern analysis and morphological segregation of smallspored Alternaria species and species groups. Mycol Res 2000;104:151-60. https://doi.org/10.1017/S0953756299001690
  40. Rao VG. The fungus genus Alternaria Nees. In Bombay- Maharashtra-1 [dissertation]. Pune: Poona University; 1964.